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| Q.C. Bui; B. Ó Nualláin; C.A.B. Boucher and P.M.A. Sloot: Extracting causal relations on HIV drug resistance from literature, BMC Bioinformatics, (PubMedID 20178611) vol. 11, nr 1 pp. 101+11. 2010. ISSN 1471-2105. (DOI: 10.1186/1471-2105-11-101)
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| D. Frentz; C.A.B. Boucher; M. Assel; A. De Luca; M. Fabbiani; F. Incardona; P. Libin; N. Manca; V. Müller; B. Ó Nualláin; R. Paredes; M.C.F. Prosperi; E. Quiros-Roldan; L. Ruiz; P.M.A. Sloot; C. Torti; A.-M. Vandamme; K. van Laethem; M. Zazzi and D.A.M.C. van de Vijver: Comparison of HIV-1 Genotypic Resistance Test Interpretation Systems in Predicting Virological Outcomes Over Time, PLoS ONE, vol. 5, nr 7 pp. e11505+9. Public Library of Science, 07 2010. (DOI: 10.1371/journal.pone.0011505)
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| M. Assel; D.A.M.C. van de Vijver; P. Liblin; K. Theys; D. Harezlak; B. Ó Nualláin; P. Nowakowski; M.T. Bubak; A.-M. Vandamme; S. Imbrechts; R. Sangeda; T. Jiang; D. Frentz and P.M.A. Sloot: A Collaborative Environment Allowing Clinical Investigations on Integrated Biomedical Databases, in T. Solomonides; M. Hofmann-Apitius; M. Freudigmann; S. C. Semler; Y. Legré and M. Kratz, editors, Healthgrid research, innovation, and business case: Proceedings of HealthGrid 2009, in series Studies in Health Technology and Informatics, vol. 147, pp. 51-61. IOS Press, jan 2009. ISBN 978-1-60750-027-8. (DOI: 10.3233/978-1-60750-027-8-51)
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| L. Caroprese; B. Ó Nualláin; P.M.A. Sloot and E. Zumpano: A Logical Framework for Detecting Anomalies in Drug Resistance Algorithms, in B.C. Desai, editor, Thirteenth International Database Engineering & Applications Symposium (IDEAS), Thirteenth International Database Engineering & Applications Symposium (IDEAS'09), Cetraro, Calabria, Italy, in series ACM International Conference Proceeding Series, pp. 23-30. ACM, Cetraro - Calabria - Italy, September 2009. ISBN:978-1-60558-402-7.
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| S.F. Portegies Zwart; S.L.W. McMillan; S. Harfst; D.J. Groen; M. Fujii; B. Ó Nualláin; E. Glebbeek; D.C. Heggie; J.C. Lombardi; P. Hut; V. Angelou; S. Banerjee; H. Belkus; T. Fragos; J.M. Fregeau; E. Gaburov; R. Izzard; M. Juric; S. Justham; A. Sottoriva; P.J. Teuben; J. van Bever; O. Yaron and M. Zemp: A multiphysics and multiscale software environment for modeling astrophysical systems, New Astronomy, vol. 14, pp. 369-378. may 2009. (DOI: 10.1016/j.newast.2008.10.006)
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| B. Ó Nualláin; D.A.M.C. van de Vijver; C.A.B. Boucher; A. Tirado Ramos and P.M.A. Sloot: Enhanced Decision Support for HIV Drug Resistance Interpretation, in Proceedings of the 6th European HIV Drug Resistance Workshop, (abstract, in press) Budapest, March 2008.
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| S.F. Portegies Zwart; S.L.W. McMillan; B. Ó Nualláin; D.C. Heggie; J.C. Lombardi; P. Hut; S. Banerjee; H. Belkus; T. Fragos; J. Fregeau; M. Fuji; E. Gaburov; E. Glebbeek; D.J. Groen; S. Harfst; R. Izzard; M. Juric; S. Justham; P.J. Teuben; J. van Bever; O. Yaron and M. Zemp: A multiphysics and multiscale software environment for modeling astrophysical systems, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II, 8th International Conference on Computational Science (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5102, pp. 207-216. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69386-4. (DOI: 10.1007/978-3-540-69387-1_23)
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| P.M.A. Sloot; A. Tirado Ramos; G. Ertaylan; B. Ó Nualláin; D.A.M.C. van de Vijver; C.A.B. Boucher and M.T. Bubak: VIROLAB: a Distributed Decision Support System for Viral Disease Treatment, in M.T. Bubak; M. Turala and K. Wiatr, editors, CGW'07 proceedings, (extended abstract) Cracow' 07 Grid Workshop (CGW'07), pp. 33-34. Krakow, Poland, October 2008. ISBN 978-83-915141-9-1.
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| P.M.A. Sloot; P.V. Coveney; M.T. Bubak; A.-M. Vandamme; B. Ó Nualláin; D.A.M.C. van de Vijver and C.A.B. Boucher: Multi-Science Decision Support for HIV Drug Resistance Treatment, in T. Solomonides; J.C. Silverstein; J. Saltz; Y. Legré; M. Kratz; I. Foster; V. Breton and J.R. Beck, editors, Global Healthgrid: e-Science Meets Biomedical Informatics - Proceedings of HealthGrid 2008, in series Studies in Health Technology and Informatics, vol. 138, pp. 188-198. IOS Press, 2008. ISBN: 978-1-58603-874-8.
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| P.M.A. Sloot; P.V. Coveney; M.T. Bubak; A.-M. Vandamme; B. Ó Nualláin; D.A.M.C. van de Vijver and C.A.B. Boucher: Virolab: A Collaborative Decision Support System in Viral Disease Treatment, Reviews in Antiviral Therapy, vol. 3, pp. 4-7. Virology Education, 2008. ISSN 1872-437X.
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| L. Feyen; J.A. Vrugt; B. Ó Nualláin; J. van der Knijff and A. De Roo: Parameter optimisation and uncertainty assessment for large-scale streamflow simulation with the LISFLOOD model, Journal of Hydrology, vol. 332, nr 3-4 pp. 276-289. Elsevier, January 2007. (DOI: 10.1016/j.jhydrol.2006.07.004)
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| J.A. Vrugt; B. Ó Nualláin; B.A. Robinson; W. Bouten; S.C. Dekker and P.M.A. Sloot: Application of parallel computing to stochastic parameter estimation in environmental models, Computers & Geosciences, vol. 32, nr 8 pp. 1139-1155. January 2006. (DOI: 10.1016/j.cageo.2005.10.015)
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| J.A. Vrugt; H.V. Gupta; B. Ó Nualláin and W. Bouten: Real-time data assimilation for operational ensemble streamflow forecasting, Journal of Hydrometeorology, vol. 7, nr 3 pp. 548-565. June 2006. (DOI: 10.1175/JHM504.1)
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| B. Ó Nualláin and S. de Rooij: Online Suffix Trees with Counts, in Proceedings of the Data Compression Conference 2004, (abstract) pp. 555. IEEE Computer Society Press, 2004. ISBN 0-7695-2082-0.
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