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Publications by M.T. (Marian) Bubak

(Reverse chronological order)
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1 S. Koulouzis; R.S. Cushing; K.A. Karasavvas; A.S.Z. Belloum and M.T. Bubak: Enabling Web Services to Consume and Produce Large Datasets, IEEE Internet Computing, vol. 16, nr 1 pp. 52-60. 2012.
2 A.S.Z. Belloum; M.A. Inda; D. Vasunin; V.V. Korkhov; Z. Zhao; H. Rauwerda; T.M. Breit; M.T. Bubak and L.O. Hertzberger: Collaborative e-Science and scientific workflows, Internet Computing, vol. 15, nr 4 pp. 39-47. IEEE, 2011. ISSN 1089-7801. (DOI: 10.1109/MIC.2011.87)
3 F. Berretz; S. Skorupa; V. Sander; A.S.Z. Belloum and M.T. Bubak: Actor-driven workflow execution in distributed environments, in Guarracino,M.R.; Vivien,F.; Träff,J.L.; Cannataro,M.; Danelutto,M.; Hast,A.; Perla,F.; Knüpfer,A.; Di Martino,B. and Alexander,M., editors, Euro-Par 2010 parallel processing workshops: HeteroPar, HPPC, HiBB, CoreGrid, UCHPC, HPCF, PROPER, CCPI, VHPC: Ischia, Italy, August 31-September 3, 2010: Revised selected papers, CoreGRID/ERCIM Workshop on Grids, Clouds and P2P Computing, Ischia, Italy, in series Lecture Notes in Computer Science, vol. 6586, pp. 287-294. Springer, Heidelberg, 2011.
4 R.S. Cushing; S. Koulouzis; A.S.Z. Belloum; R.J. Strijkers and M.T. Bubak: Service Level Management for Executable Papers, in 7th International European Conference on Parallel and Distributed Computing (Euro-Par 2011), workshop MDGS2011, 17th International Conference on Parallel and Distributed Computing, 2011. (DOI: 10.1007/978-3-642-23397-5)
5 R.S. Cushing; S. Koulouzis; A.S.Z. Belloum and M.T. Bubak: Prediction-based Auto-scaling of Scientific Workflows, in 9th International Workshop on Middleware for Grids, Clouds and e-Science - MG, MGC workshop conjunction with ACM/IFIP/USENIX 12th International Middleware Conference 2011, pp. 1-6. 2011.
6 R.S. Cushing; S. Koulouzis; A.S.Z. Belloum and M.T. Bubak: Dynamic Handling for Cooperating Scientific Web Services, in The seventh e-Science conference, The seventh e-Science conference, pp. 232-239. IEEE, 2011.
7 V.V. Krzhizhanovskaya; G.S. Shirshov; N.B. Melnikova; R.G. Belleman; F.I. Rusadi; B.J. Broekhuijsen; B.P. Gouldby; J. Lhomme; B. Baliś; M.T. Bubak; A.L. Pyayt; I.I. Mokhov; A.V. Ozhigin; B. Lang and R.J. Meijer: Flood early warning system: design, implementation and computational modules, in M. Sato; S. Matsuoka; G.D. van Albada; J. Dongarra and P.M.A. Sloot, editors, Proceedings of the International Conference on Computational Science, ICCS 2011, in series Procedia Computer Science, vol. 4, nr 1 pp. 106 - 115. Elsevier, 2011. ISSN 1877-0509. (DOI: 10.1016/j.procs.2011.04.012)
8 J.T. Mościcki; M. Lamanna; M.T. Bubak and P.M.A. Sloot: Processing moldable tasks on the grid: Late job binding with lightweight user-level overlay, Future Generation Computer Systems, vol. 27, nr 6 pp. 725-736. June 2011. ISSN 0167-739X. (DOI: 10.1016/j.future.2011.02.002)
9 U. Schwiegelshohn; R.M. Badia; M.T. Bubak; M. Danelutto; S. Dustdar; F. Gagliardi; A. Geiger; L. Hluchy; D. Kranzlmüller; E. Laure; T. Priol; A. Reinefeld; M. Resch; A. Reuter; O. Rienhoff; T. Rüter; P.M.A. Sloot; D. Talia; K. Ullmann; R. Yahyapour and G. von Voigt: Perspectives on grid computing, Future Generation Computer Systems, vol. 26, nr 8 pp. 1104-1115. 2010. ISSN 0167-739X. (DOI: 10.1016/j.future.2010.05.010)
10 M. Assel; D.A.M.C. van de Vijver; P. Liblin; K. Theys; D. Harezlak; B. Ó Nualláin; P. Nowakowski; M.T. Bubak; A.-M. Vandamme; S. Imbrechts; R. Sangeda; T. Jiang; D. Frentz and P.M.A. Sloot: A Collaborative Environment Allowing Clinical Investigations on Integrated Biomedical Databases, in T. Solomonides; M. Hofmann-Apitius; M. Freudigmann; S. C. Semler; Y. Legré and M. Kratz, editors, Healthgrid research, innovation, and business case: Proceedings of HealthGrid 2009, in series Studies in Health Technology and Informatics, vol. 147, pp. 51-61. IOS Press, jan 2009. ISBN 978-1-60750-027-8. (DOI: 10.3233/978-1-60750-027-8-51)
11 T. Bartynski; M.T. Bubak; T. Gubała; D. Harezlak; M. Kasztelnik; J. Kocot and P. Nowakowski: Environment for collaborative e-science applications: CGW08 tutorial, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings, pp. 58-60. Academic Computer Centre CYFRONET AGH, 2009. ISBN 978-83-61433-00-2.
12 M.T. Bubak; T. Gubała; M. Malawski; B. Baliś; W. Funika; T. Bartynski; E. Ciepiela; D. Harezlak; M. Kasztelnik; J. Kocot; D. Król; P. Nowakowski; M. Pelczar and M. Assel: A platform for collaborative e-science applications, in KU KDM 2009: druga konferencja uytkownikw komputerw duej mocy: Zakopane, March 1213, 2009: abstracts, pp. 7-9. ACK Cyfronet AGH, 2009.
13 M.T. Bubak; M. Turała and K. Wiatr: Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings, Academic Computer Centre CYFRONET AGH, 2009. ISBN 978-83-61433-00-2.
14 M.T. Bubak; M. Malawski; T. Gubała; M. Kasztelnik; P. Nowakowski; D. Harezlak; T. Bartynski; J. Kocot; E. Ciepiela; W. Funika; D. Król; B. Baliś; M. Assel and A. Tirado Ramos: Chapter XXVII: Virtual Laboratory for Collaborative Applications, in M. Cannataro, editor, Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, IGI Publishing, Medical Information Science Reference, may 2009. ISBN: 978-1-60566-374-6.
15 T. Gubała; M.T. Bubak and P.M.A. Sloot: Chapter XXVI: Semantic Integration for Research Environments, in M. Cannataro, editor, Handbook of Research on Computational Grid Technologies for Life Sciences, Biomedicine and Healthcare, IGI Publishing, Medical Information Science Reference, may 2009. ISBN: 978-1-60566-374-6.
16 J. Kitowski; M. Turała; K. Wiatr; M.T. Bubak; A. Kusznir; J. Niwicki; T. Szepieniec; M. Radecki; A. Ozieblo; Z. Mosurska; A. Szymańska; K. Krawentek and et al.: Structure and status of National Grid Initiative in Poland, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings, pp. 39-51. Academic Computer Centre CYFRONET AGH, 2009. ISBN 978-83-61433-00-2.
17 J. Meizner; M. Malawski; S. Naqvi and M.T. Bubak: Threat model for MOCCA component environment, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings, pp. 94-102. Academic Computer Centre CYFRONET AGH, 2009. ISBN 978-83-61433-00-2.
18 W. Rzasa and M.T. Bubak: Application of Petri nets to evaluation of Grid applications efficiency, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'08 Grid Workshop: October 13-15, 2008 Cracow, Poland: proceedings, pp. 261-269. Academic Computer Centre CYFRONET AGH, 2009. ISBN 978-83-61433-00-2.
19 P.M.A. Sloot; P.V. Coveney; G. Ertaylan; V. Müller; C.A.B. Boucher and M.T. Bubak: HIV Decision Support: From Molecule to Man, Phil . Trans. R. Soc. A, vol. 367, nr 1898 pp. 2691-2703. 2009. (DOI: 10.1098/rsta.2009.0043)
20 S. Gorlatch; M.T. Bubak and T. Priol, editors: Achievements in European Research on Grid Systems, (ISBN 978-0-387-72811-7) Springer, USA, 2008.
21 M. Assel; P. Nowakowski and M.T. Bubak: Integrating and accessing medical data resources within the ViroLab Virtual Laboratory, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 90-99. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
22 R.M. Badia; R. Sirvent; M.T. Bubak; W. Funika and P. Machner: Performance monitoring of GRID superscalar with OCM-G/G-PM: integration issues, in S. Gorlatch; M.T. Bubak and T. Priol, editors, Achievements in European Reseach on Grid Systems. CoreGRID Integration Workshop 2006 (Selected Papers), (Also published as CoreGRID Technical Report TR-0108) CoreGRID Integration Workshop 2006 (CGIW'2006), Krakow, Poland, pp. 193-205. Springer, 2008.
23 R.M. Badia; R. Sirvent; M.T. Bubak; W. Funika and P. Machner: Performance monitoring of Grid superscalar: visualization modes, in S. Gorlatch; P. Fragopoulou and T. Priol, editors, CoreGRID integration workshop 2008 - Integrated Research in Grid Computing: April 24, Hersonissos, Crete, Greece, pp. 266-274. Crete University Press, Heraklion, 2008. ISBN 978-960-524-260-2.
24 B. Baliś; M.T. Bubak; M. Pelczar and J. Wach: Provenance tracking and querying in the ViroLab Virtual Laboratory, in T. Priol; L. Lefevre and R. Buyya, editors, CCGRID 2008: eighth IEEE international symposium on Cluster Computing and the Grid: 19-22 May 2008, Lyon, France, 8th IEEE International Symposium on Cluster Computing and the Grid (CCGrid 2008), Lyon, France, pp. 675-680. CPS Conference Publishing Services, IEEE Computer Society, 2008. ISBN 978-0-7695-3156-4.
25 B. Baliś; M.T. Bubak; M. Pelczar and J. Wach: Provenance tracking and querying in ViroLab, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, pp. 71-76. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
26 B. Baliś; M.T. Bubak; M. Pelczar and J. Wach: Provenance querying for end-users: a drug resistance case study, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 80-89. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
27 B. Baliś; M.T. Bubak and B. Labno: Monitoring of Grid scientific workflows, Scientific Programming, (In special issue: Large-scale programming tools and environments) vol. 16, nr 2, 3 pp. 205-216. 2008. ISSN 1058-9244. (DOI: 10.3233/SPR-2008-0257)
28 B. Baliś; M.T. Bubak and M. Wegiel: LGF: a flexible framework for exposing legacy codes as services, Future Generation Computer Systems, vol. 24, nr 7 pp. 711-719. 2008. ISSN 0167-739X. (DOI: 10.1016/j.future.2007.12.001)
29 B. Baliś and M.T. Bubak: An ontology model for execution records of Grid scientific applications, in SKG2008: proceedings of the fourth international conference on Semantics, Knowledge, and Grid, 4th International Conference on Semantics, Knowledge and Grid (SKG2008), Beijing, China, pp. 34-41. IEEE, Beijing, China, December 2008. ISBN 978-0-7695-3401-5. (DOI: 10.1109/SKG.2008.100)
30 B. Baliś; M.T. Bubak and J. Wach: Provenance tracking in the ViroLab Virtual Laboratory, in R. Wyrzykowski; J.J. Dongarra; K. Karczewski and J. Waśniewski, editors, Parallel Processing and Applied Mathematics: 7th international conference, PPAM 2007: Gdask, Poland, September 9-12, 2007: revised selected papers, in series Lecture Notes in Computer Science, nr 4967 pp. 381-390. Springer-Verlag, Berlin ; Heidelberg, 2008. ISBN-10 3-540-68105-1, ISBN-13 978-3-540-68105-2.
31 T. Bartynski; M. Malawski and M.T. Bubak: Invocation of Grid operations in the ViroLab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, Cracow' 07 Grid Workshop (CGW'07), Cracow, Poland, pp. 59-64. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
32 T. Bartynski; M. Malawski; T. Gubała and M.T. Bubak: Universal Grid client: Grid Operation Invoker, in R. Wyrzykowski; J.J. Dongarra; K. Karczewski and J. Waśniewski, editors, Parallel Processing and Applied Mathematics: 7th international conference, PPAM 2007: Gdask, Poland, September 9-12, 2007: revised selected papers, in series Lecture Notes in Computer Science, nr 4967 pp. 1068-1077. Springer-Verlag, Berlin ; Heidelberg, 2008. ISBN-10 3-540-68105-1, ISBN-13 978-3-540-68105-2.
33 A.S.Z. Belloum; Z. Zhao and M.T. Bubak: International workshop on Applications of Workflows in Computational Science (AWCS 08), in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 459-462. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
34 M.T. Bubak; D. Harezlak; P. Nowakowski; T. Gubała and M. Malawski: Appea: a framework for the design and development of business applications on the Grid, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 1517, 2007 Cracow, Poland, pp. 220-225. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
35 M.T. Bubak; T. Gubała; M. Malawski; B. Baliś; W. Funika; T. Bartynski; E. Ciepiela; D. Harezlak; M. Kasztelnik; J. Kocot; D. Król; P. Nowakowski; M. Pelczar; J. Wach; M. Assel and A. Tirado Ramos: Virtual Laboratory for Development and Execution of Biomedical Collaborative Applications, in 21th IEEE International Symposium on Computer-Based Medical Systems (CBMS 2008), pp. 373-378. IEEE, Jyväskylä, Finland, June 2008. ISBN: 978-0-7695-3165-6. (DOI: 10.1109/CBMS.2008.47)
36 M.T. Bubak; G.D. van Albada; J. Dongarra and P.M.A. Sloot: Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part I, in series Lecture Notes in Computer Science, vol. 5101, 1051 pages. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69383-3.
37 M.T. Bubak; G.D. van Albada; J. Dongarra and P.M.A. Sloot: Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II, in series Lecture Notes in Computer Science, vol. 5102, 745 pages. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69386-4.
38 M.T. Bubak; G.D. van Albada; J. Dongarra and P.M.A. Sloot: Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, in series Lecture Notes in Computer Science, vol. 5103, 751 pages. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69388-8.
39 M.T. Bubak; M. Turała and K. Wiatr: Cracow'07 Grid Workshop: October 1517, 2007 Cracow, Poland: proceedings, Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
40 E. Ciepiela; J. Kocot; T. Gubała; M. Malawski; M. Kasztelnik and M.T. Bubak: GridSpace Engine of the ViroLab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, Cracow' 07 Grid Workshop (CGW'07), Cracow, Poland, pp. 53-58. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
41 W. Funika; D. Harezlak; D. Król; P. Pegiel and M.T. Bubak: User interfaces of the Virolab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, pp. 47-52. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
42 W. Funika; M. Zientarski; R.M. Badia; J. Labarta and M.T. Bubak: OCM2PRV: performance visualization of Grid applications based on OCM-G and Paraver, in S. Gorlatch; P. Fragopoulou and T. Priol, editors, CoreGRID integration workshop 2008 - Integrated Research in Grid Computing: April 24, Hersonissos, Crete, Greece, pp. 87-98. Crete University Press, Heraklion, 2008. ISBN 978-960-524-260-2.
43 W. Funika; D. Harezlak; D. Król and M.T. Bubak: Environment for collaborative development and execution of Virtual Laboratory applications, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 446-455. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
44 T. Gubała; B. Baliś; M. Malawski; M. Kasztelnik; P. Nowakowski; M. Assel; D. Harezlak; T. Bartynski; J. Kocot; E. Ciepiela; D. Król; J. Wach; M. Pelczar; W. Funika and M.T. Bubak: ViroLab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, pp. 35-40. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
45 T. Gubała; M. Kasztelnik; M. Malawski and M.T. Bubak: Towards a System-Level Science Support, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part I, in series Lecture Notes in Computer Science, vol. 5101, pp. 56-65. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69383-3.
46 A.G. Hoekstra; S.F. Portegies Zwart; M.T. Bubak and P.M.A. Sloot: Towards Distributed Petascale Computing, Chapter 8, in D.A. Bader, editor, Petascale Computing: Algorithms and Applications, pp. 147-164. Chapman & Hall, mar 2008. ISBN: 9781584889090, ISBN 10: 1584889098.
47 M. Kasztelnik; T. Gubała; M. Malawski and M.T. Bubak: Development and execution of collaborative application on the ViroLab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, Cracow' 07 Grid Workshop (CGW'07), Cracow, Poland, pp. 41-46. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
48 B. Kowalewski; M.T. Bubak and B. Baliś: An event-based approach to reducing coupling in large-scale applications, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 358-367. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
49 B. Labno; M.T. Bubak and B. Baliś: A P2P approach to resource discovery in on-line monitoring of Grid workflows, in E. Luque; T. Margalef and D. Benítez, editors, Euro-Par 2008: parallel processing: 14th international Euro-Par conference: Las Palmas de Gran Canaria, Spain, August 26-29, 2008, 14th International Conference on Parallel and Distributed Computing (Euro-Par 2008), Las Palmas de Gran Canaria, Spain, in series Lecture Notes in Computer Science, vol. 5168, pp. 37-46. Springer-Verlag, Berlin ; Heidelberg, 2008. ISBN-10 3-540-85450-9 ; ISBN-13 978-3-540-85450-0. (DOI: 10.1007/978-3-540-85451-7_5)
50 M. Malawski; J. Kocot; E. Ciepiela and M.T. Bubak: Optimization of application execution in the ViroLab Virtual Laboratory, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, Cracow' 07 Grid Workshop (CGW'07), Cracow, Poland, pp. 65-70. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
51 M. Malawski; J. Kocot; I. Ryszka; M.T. Bubak; M. Wieczorek and T. Fahringer: Optimization of Application Execution in the GridSpace Environment, Institute on Resource Management and Scheduling, CoreGRID - Network of Excellence, number TR-0131, March 2008.
52 M. Malawski; T. Gubała; M. Kasztelnik; T. Bartynski and M.T. Bubak: High-level scripting approach for building component-based applications on the Grid, in M. Danelutto; P. Fragopoulou and V.S. Getov, editors, Making Grids Work: proceedings of the CoreGRID workshop on Programming models Grid and P2P system architecture Grid systems, tools and environments: 1213 June 2007, Heraklion, Crete, Greece, CoreGRID Workshop on Grid Programming Model, Grid and P2P Systems Architecture, Grid Systems, Tools and Environments, Heraklion, Crete, Greece, pp. 309-321. Springer Science+Business Media, 2008. ISBN-13 978-0-387-78447-2.
53 M. Malawski; T. Bartynski and M.T. Bubak: A tool for building collaborative applications by invocation of Grid Operations, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5103, pp. 243-252. Springer, Berlin, Heidelberg, June 2008. ISBN-13 978-3-540-69388-8.
54 M. Malawski; J. Kocot; I. Ryszka; M.T. Bubak and M. Wieczorek: Optimization of application execution in the GridSpace environment, in S. Gorlatch; P. Fragopoulou and T. Priol, editors, CoreGRID integration workshop 2008 - Integrated Research in Grid Computing: April 24, Hersonissos, Crete, Greece, CoreGRID integration workshop 2008: Integrated Research in Grid Computing, pp. 395-405. Crete University Press, Heraklion, 2008. ISBN 978-960-524-260-2.
55 K.J. Rycerz; P.M.A. Sloot and M.T. Bubak: Dynamic Interactions in HLA Component Model for Multiscale Simulations, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part II, in series Lecture Notes in Computer Science, vol. 5102, pp. 217-226. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69386-4.
56 K.J. Rycerz; M.T. Bubak and P.M.A. Sloot: Using HLA and Grid for Distributed Multiscale Simulations, in R. Wyrzykowski; K. Karczewski; J.J. Dongarra and J. Waśniewski, editors, Parallel Processing and Applied Mathematics: 7th International Conference, PPAM 2007, Gdansk, Poland, September 9-12, 2007 Revised Selected Papers, 7th International Conference on Parallel Processing and Applied Mathematics (PPAM 2007), GdaÅ„sk, Poland, in series Lecture Notes in Computer Science, vol. 4967, pp. 780-787. Springer, Berlin, Heidelberg, May 2008. 978-3-540-68105-2. (DOI: 10.1007/978-3-540-68111-3)
57 K.J. Rycerz; M.T. Bubak; P.M.A. Sloot and V.S. Getov: Problem solving environment for distributed interactive applications, in S. Gorlatch; M.T. Bubak and T. Priol, editors, Achievements in European Research on Grid Systems - CoreGRID Integration Workshop 2006 (Selected Papers), CoreGRID Integration Workshop (CGIW'2006), Krakow, Poland, pp. 55-66. Springer, 2008. ISBN-13 978-0-387-72811-7.
58 K.J. Rycerz; M.T. Bubak and P.M.A. Sloot: HLA component model on the example of multiscale simulation, in M.T. Bubak; M. Turala and K. Wiatr, editors, Proceedings of Cracow'07 Grid Workshop, Oct 15-17 2007, Cracow, Poland, ACC Cyfronet AGH, pp. 272-275. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
59 K.J. Rycerz; M.T. Bubak and P.M.A. Sloot: HLA component based environment for distributed multiscale simulations, in T. Priol and M. Vanneschi, editors, From Grids to service and pervasive computing, CoreGRID symposium, CoreGRID Symposium 2008, Las Palmas de Gran Canaria, Spain, pp. 229-239. Springer, 2008. ISBN-13 978-0-387-09454-0.
60 K.J. Rycerz; M.T. Bubak; P.M.A. Sloot and V.S. Getov: HLA Component Based Environment for Distributed Multiscale Simulations, Institute on Grid Systems, Tools, and Environments, CoreGRID - Network of Excellence, number TR-0137, April 2008.
61 P.M.A. Sloot; A. Tirado Ramos; G. Ertaylan; B. Ó Nualláin; D.A.M.C. van de Vijver; C.A.B. Boucher and M.T. Bubak: VIROLAB: a Distributed Decision Support System for Viral Disease Treatment, in M.T. Bubak; M. Turala and K. Wiatr, editors, CGW'07 proceedings, (extended abstract) Cracow' 07 Grid Workshop (CGW'07), pp. 33-34. Krakow, Poland, October 2008. ISBN 978-83-915141-9-1.
62 P.M.A. Sloot; P.V. Coveney; M.T. Bubak; A.-M. Vandamme; B. Ó Nualláin; D.A.M.C. van de Vijver and C.A.B. Boucher: Multi-Science Decision Support for HIV Drug Resistance Treatment, in T. Solomonides; J.C. Silverstein; J. Saltz; Y. Legré; M. Kratz; I. Foster; V. Breton and J.R. Beck, editors, Global Healthgrid: e-Science Meets Biomedical Informatics - Proceedings of HealthGrid 2008, in series Studies in Health Technology and Informatics, vol. 138, pp. 188-198. IOS Press, 2008. ISBN: 978-1-58603-874-8.
63 P.M.A. Sloot; P.V. Coveney; M.T. Bubak; A.-M. Vandamme; B. Ó Nualláin; D.A.M.C. van de Vijver and C.A.B. Boucher: Virolab: A Collaborative Decision Support System in Viral Disease Treatment, Reviews in Antiviral Therapy, vol. 3, pp. 4-7. Virology Education, 2008. ISSN 1872-437X.
64 T. Szepieniec and M.T. Bubak: Investigation of the DAG eligible jobs maximization algorithm in a grid, in The 9th IEEE/ACM international conference on Grid computing (Grid 2008), 9th IEEE/ACM International Conference on Grid Computing (Grid 2008), Tsukuba, Japan, pp. 340-345. IEEE, Tsukuba, Japan, 2008. ISBN 978-1-4244-2579-2.
65 T. Szepieniec and M.T. Bubak: Evaluation of eligible jobs maximization algorithm for DAG scheduling in grids, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part I, (Also on CD-ROM) International Conference on Computational Science 2008 (ICCS 2008), Kraków, Poland, in series Lecture Notes in Computer Science, vol. 5101, pp. 254-263. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69383-3.
66 A. Tirado Ramos; P.M.A. Sloot and M.T. Bubak: Grid-based Interactive Decision Support in BioMedicine, in T. El-Ghazali and A.Y. Zomaya, editors, Grids for Bioinformatics and Computational Biology, in series Wiley series on bioinformatics : computational techniques and engineering, pp. 225-246. John Wiley and Sons, USA, January 2008. ISBN: 978-0-471-78409-8.
67 A. Wibisono; Z. Zhao; A.S.Z. Belloum and M.T. Bubak: Towards a Virtual Laboratory for interactive parameter Sweep applications on the Grid, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland, pp. 266-271. Academic Computer Centre CYFRONET AGH, 2008. ISBN 978-83-915141-9-1.
68 A. Wibisono; Z. Zhao; A.S.Z. Belloum and M.T. Bubak: A Framework for Interactive Parameter Sweep Applications, in M.T. Bubak; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, Computational Science - ICCS 2008: 8th International Conference, Krakow, Poland, Proceedings, Part III, in series Lecture Notes in Computer Science, vol. 5103, pp. 481-490. Springer, Berlin, Heidelberg, June 2008. 978-3-540-69388-8.
69 R.M. Badia; R. Sirvent; M.T. Bubak; W. Funika and P. Machner: Performance Monitoring of Grid Superscalar with OCM-G/G-PM: Tuning and Improvements, in CoreGRID Workshop on Grid Programming Model, Grid and P2P Systems Architecture, Grid Systems, Tools and Environments, 2007.
70 R.M. Badia; R. Sirvent; M.T. Bubak; W. Funika and P. Machner: Performance monitoring of GRID superscalar with OCM-G/G-PM: integration issues, Institute on Grid Systems, Tools and Environments, number TR-0108, September 2007.
71 B. Baliś; M.T. Bubak; K. Sterna and A. Bemben: Efficient and Reliable Execution of Legacy Codes Exposed as Services, in Y. Shi; G.D. van Albada; J.J. Dongarra and P.M.A. Sloot, editors, International Conference on Computational Science (1), in series Lecture Notes in Computer Science, vol. 4487, pp. 390-397. Springer, 2007.
72 B. Baliś; M.T. Bubak and M. Pelczar: From monitoring data to experimental information monitoring of Grid scientific workflows, in G. Fox; K. Chiu and R. Buyya, editors, Third IEEE international conference on e-Science and Grid computing: Bangalore, India, 10-13 December 2007, pp. 77-84. IEEE Computer Society, Piscataway, NJ, 2007. ISBN-10: 0-7695-3064-8.
73 B. Baliś; M.T. Bubak and B. Labno: GEMINI: Generic Monitoring Infrastructure for Grid resources and applications, in M.T. Bubak and S. Unger, editors, pp. 60-73. Academic Computer Centre CYFRONET AGH, 2007. ISBN 978-83-915141-8-4.
74 B. Baliś; M.T. Bubak and J. Wach: Provenance tracking in the Virolab Virtual Laboratory, in PPAM 2007: 7th international conference on Parallel Processing & Applied Mathematics: Gdask, Poland, September 9-12, Book of abstracts, (abstract) pp. 50-50. 2007.
75 T. Bartynski; M. Malawski; T. Gubała and M.T. Bubak: Universal Grid client: Grid Operation Invoker, in PPAM 2007: 7th international conference on Parallel Processing & Applied Mathematics: Gdask, Poland, September 9-12, Book of abstracts, (abstract) pp. 93-93. 2007.
76 M.T. Bubak; T. Gubała; M. Kasztelnik; M. Malawski; P. Nowakowski and P.M.A. Sloot: Collaborative Virtual Laboratory for e-Health, in P. Cunningham and M. Cunningham, editors, Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings, pp. 537-544. IOS Press, Amsterdam, 2007. ISBN 978-1-58603-801-4 (paper), ISBN: 978-1-905824-05-2 (CD).
77 M.T. Bubak; D. Harezlak; P. Nowakowski; T. Gubała and M. Malawski: Appea: A Platform for Development and Execution of Grid Applications, in P. Cunningham and M. Cunningham, editors, Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings, (ISBN 978-1-58603-801-4) pp. 123-130. IOS Press, Amsterdam, 2007.
78 M.T. Bubak and S. Unger: Cracow'06 Grid Workshop, Vol 2: K-Wf Grid: the knowledge-based workflow system for Grid applications: October 15-18, 2006 Cracow, Poland, Academic Computer Centre CYFRONET AGH, 2007. ISBN 978-83-915141-8-4.
79 M.T. Bubak; M. Turała and K. Wiatr: Cracow'06 Grid Workshop, Vol 1: October 15-18, 2006 Cracow, Poland: proceedings, Academic Computer Centre CYFRONET AGH, 2007. ISBN 83-915141-7-X.
80 M.T. Bubak; P. Nowakowski and S. Unger: K-WfGrid knowledge-based workflow system for Grid applicatiobs, in M.T. Bubak and S. Unger, editors, Cracow'06 Grid Workshop, Vol 2: K-Wf Grid: the knowledge-based workflow system for Grid applications: October 15-18, 2006 Cracow, Poland, pp. 1-12. Academic Computer Centre CYFRONET AGH, 2007. ISBN 978-83-915141-8-4.
81 M.T. Bubak; M. Malawski; P. Nowakowski and S. Unger: Software engineering aspects of K-WfGrid, in M.T. Bubak and S. Unger, editors, Cracow'06 Grid Workshop, Vol 2: K-Wf Grid: the knowledge-based workflow system for Grid applications: October 15-18, 2006 Cracow, Poland, pp. 162-169. Academic Computer Centre CYFRONET AGH, 2007. ISBN 978-83-915141-8-4.
82 T. Gubała; D. Harezlak; M.T. Bubak and M. Malawski: Constructing abstract workflows of applications with workflow composition tool, in M.T. Bubak and S. Unger, editors, Cracow'06 Grid Workshop, Vol 2: K-Wf Grid: the knowledge-based workflow system for Grid applications: October 15-18, 2006 Cracow, Poland, pp. 25-30. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2007. ISBN 978-83-915141-8-4.
83 M. Kasztelnik; M.T. Bubak; C. Górka; M. Malawski and T. Gubała: Fault tolerant Grid registery, in P. Kacsuk; T. Fahringer and Z. Németh, editors, Distributed and parallel systems: from cluster to Grid computing, pp. 135-144. Springer Science+Business Media, New York, NY, USA, 2007. ISBN-13: 978-0-387-69857-1 ; e-ISBN-13: 978-0-387-69858-8.
84 J. Kitowski; K. Boryczko; M.T. Bubak; W. Dzwinel; W. Funika and R. Slota: Rozwój srodków i narzedzi informatyki dla potrzeb symulacji i budowy aplikacji gridowych (Development of tools and environments for computer simulations and grid applications), Pomiary, Automatyka, Kontrola, vol. 53, nr 3 pp. 26-40. Stowarzyszenie Inynierw i Technikw Mechanikw Polskich. Sekcja Metrologii, Polskie Stowarzyszenie Pomiarw Automatyki i Robotyki POLSPAR, 2007. ISSN 0032-4140.
85 M. Malawski; T. Bartynski; E. Ciepiela; J. Kocot; P. Pelczar and M.T. Bubak: A new approach to supporting component applications on Grid, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '06 Grid Workshop, October 15-18, 2006, pp. 328-336. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2007. ISBN 83-915141-7-X.
86 M. Malawski; M.T. Bubak; F. Baude; D. Caromel; L. Henrio and M. Morel: Interoperability of grid component models: GCM and CCA case study, in T. Priol and M. Vanneschi, editors, Towards Next Generation Grids, proceedings of the CoreGRID Symposium in conjunction with Euro-Par 2007, in series CoreGRID series, pp. 95-105. Springer Verlag, August 2007. ISBN 978-0-387-72497-3.
87 M. Malawski; T. Gubała; M. Kasztelnik; T. Bartynski and M.T. Bubak: Towards A High-Level Scripting Approach for Building Component-Based Gridspace Applications, in M. Danelutto; P. Fragopoulou and V.S. Getov, editors, CoreGRID Workshop on Grid Programming Model, Grid and P2P Systems Architecture, Grid Systems, Tools and Environments, pp. 309-321. Springer, 2007. ISBN-13 978-0-387-78447-2.
88 J.T. Mościcki; M.T. Bubak; H.C. Lee; A. Muraru and P.M.A. Sloot: Quality of Service on the Grid with User Level Scheduling, in M.T. Bubak; M. Turala and K. Wiatr, editors, CGW'06 Proceedings, pp. 119-129. Cracow, Poland, July 2007. ISBN 83-915141-7-X.
89 K.J. Rycerz; M.T. Bubak; P.M.A. Sloot and V.S. Getov: Problem Solving Environment for Distributed Interactive Applications, Institute on Grid Systems, Tools and Environments, number TR-0107, August 2007.
90 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: Multiple HLA Federate Processes in Grid Environment, in M.T. Bubak; M. Turala and K. Wiatr, editors, CGW'06 Proceedings, (abstract) pp. 293-294. Cracow, Poland, July 2007. ISBN 83-915141-7-X.
91 K.J. Rycerz; A. Tirado Ramos; A. Gualandris; S.F. Portegies Zwart; M.T. Bubak and P.M.A. Sloot: Interactive N-Body Simulations On the Grid: HLA Versus MPI, International Journal of High Performance Computing Applications, (Selected papers from EuroPVM/MPI 2005 conference, Sorrento, Italy, 18-21 September 2005) vol. 21, nr 2 pp. 210-221. SAGE Publications, 2007. ISSN 1094-3420.
92 W. Rzasa; M.T. Bubak; B. Baliś and T. Szepieniec: Overhead verification for cryptographically secured transmission on the Grid, Computing and Informatics, vol. 26, nr 1 pp. 89-101. Slovak Academy of Sciences. Institute of Informatics, 2007. ISSN 1335-9150.
93 P.M.A. Sloot; A. Tirado Ramos and M.T. Bubak: Multi-Science Decision Support for HIV Drug Resistance Treatment, in P. Cunningham and M. Cunningham, editors, Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings, pp. 597-606. IOS Press, Amsterdam, 2007. ISBN 978-1-58603-801-4 (paper), ISBN: 978-1-905824-05-2 (CD).
94 R.M. Badia; R. Sirvent; M.T. Bubak; W. Funika; C. Klus; P. Machner and M. Smetek: Performance Monitoring of Grid Superscalar with OCM-G/G-PM: Integration Issues, in S. Gorlatch; M.T. Bubak and T. Priol, editors, Proc. of the CoreGRID Integration Workshop, Oct 19-20, 2005, Krakow, Poland, pp. 321-331. Academic Computer Centre CYFRONET AGH, Krakow, Poland, October 2006.
95 R.M. Badia; O. Beckmann; S. Panagiotidi; M.T. Bubak; M. Malawski; D. Caromel; L. Henrio; N. Parlavantzas; V.S. Getov; S. Isaiadis; J. Thiyagalingam and V. Lazarov: Lightweight Grid Platform: Design Methodology, Institute on Problem Solving Environment, Tools and Grid Systems, CoreGRID - Network of Excellence, number TR-0020, January 2006.
96 R.M. Badia; W. Funika; M. Smetek and M.T. Bubak: Integrating of the OCM-G Monitoring System into the GRID Superscalar, in M.T. Bubak; M. Turala and K. Wiatr, editors, Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, pp. 124-130. Academic Computer Centre CYFRONET AGH, Cracow, Poland, November 2006.
97 B. Baliś; M.T. Bubak; J. Dziwisz and K. Rozkwitalski: Towards a Generic P2P Monitoring Infrastructure for Grid Resources and Applications, in Proc. 2nd CoreGRID Workshop on GRID and Peer to Peer Systems Architecture, (CD-ROM) pp. 17++. Paris, France, January 2006.
98 B. Baliś; H.-L. Truong; M.T. Bubak; T. Fahringer; K. Guzy and K. Rozkwitalski: An Instrumentation Infrastructure for Grid Workflow Applications, in R. Meersman and et al., editors, International Symposium on Grid Computing, High-Performance and Distributed Applications, in series Lecture Notes on Computer Science, vol. 4276, pp. 1305-1314. Springer Verlag, Montpellier, France, November 2006.
99 B. Baliś; M.T. Bubak and K. Guzy: Fine-grained instrumentation and monitoring of legacy applications in a service-oriented environment, in V.N. Alexandrov; G.D. van Albada; P.M.A. Sloot and J.J. Dongarra, editors, Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part II, (Also on CD) in series Lecture Notes in Computer Science, vol. 3992, pp. 542-548. Springer, Berlin, Heidelberg, May 2006. ISBN 3-540-34381-4.
100 B. Baliś; M.T. Bubak and K. Guzy: Fine-grained instrumentation and monitoring of legacy applications in a service-oriented environment, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, (abstract) pp. 158-159. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
101 B. Baliś; M.T. Bubak; J. Dziwisz; K. Rozkwitalski and S. Hurnik: GEMINI - a universal monitoring framework: concept, design, and first prototype: [abstract], in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, (abstract) pp. 122-123. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
102 M.T. Bubak; W. Funika; D. Dziok; M. Koch; A.D. Malony; M. Smetek and R. Wismüller: Performance visualization in real time monitoring of Web service application, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, pp. 160-166. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
103 M.T. Bubak; M. Kasztelnik; C. Górka; M. Malawski and T. Gubała: Fault tolerance and data synchronization in Grid registry for workflow applications, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, (abstract) pp. 57. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
104 M.T. Bubak; M. Malawski; E. Richter-Was; G. Sala and T. Szymocha: Experiments with distributed training of neural networks on the Grid, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, (abstract) pp. 375. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
105 M.T. Bubak; M. Turała and K. Wiatr: Cracow '05 Grid Workshop, November 20-23 2005, Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
106 M.T. Bubak; M. Malawski and M. Placek: Using MOCCA Component Environment for Simulation of Gold Clusters, in M.T. Bubak; M. Turala and K. Wiatr, editors, Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, pp. 295-299. ACC-Cyfronet AGH, Krakow, Poland, 2006.
107 W. Funika; P. Godowski; P. Pegiel and M.T. Bubak: Towards user-defined performance monitoring of distributed Java applications, in P.M.A. Sloot; G.D. van Albada; M.T. Bubak and A. Trefethen, editors, 2nd IEEE International Conference on e-Science and Grid Computing, (Full paper on CD ROM) pp. 54+7. IEEE, 2006. ISBN 0-7695-2734-5. (DOI: 10.1109/E-SCIENCE.2006.144)
108 S. Gorlatch; M.T. Bubak and T. Priol: CoreGRID Integration Workshop 2006: CGIW'2006: integrated research in Grid computing, Academic Computer Centre CYFRONET AGH, Kraków, Poland, October 2006.
109 T. Gubała; M.T. Bubak and M. Malawski: Support for automatic workflow composition based on ontologies in semantic Grid environment, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, pp. 34-40. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
110 T. Gubała; D. Harezlak; M.T. Bubak and M. Malawski: Semantic composition of scientific workflows based on the Petri nets formalism, in P.M.A. Sloot; G.D. van Albada; M.T. Bubak and A. Trefethen, editors, 2nd IEEE International Conference on e-Science and Grid Computing, (Full paper on CD ROM) pp. 12+8 issn_isbn = ISBN 0-7695-2734-5. IEEE, 2006. (DOI: 10.1109/E-SCIENCE.2006.127)
111 L. Kirchev; M. Blyantov; V. Georgiev; K. Boyanov; M. Malawski; M.T. Bubak; S. Isaiadis and V.S. Getov: Security Models for Lightweight Grid Architectures, Institute on Grid Systems, Tools and Environments, CoreGRID - Network of Excellence, number TR-0023, January 2006.
112 M. Malawski; T. Bartynski; E. Ciepiela; J. Kocot; P. Pelczar and M.T. Bubak: An ADL-based Support for CCA Components on the Grid, in CoreGRID Workshop on Grid Systems, Tools and Environments in Conjunction with GRIDS@work: CoreGRID Conference, Grid Plugtests and Contest, Sophia-Antipolis, France, December 2006.
113 M. Malawski; M.T. Bubak; M. Placek; D. Kurzyniec and V.S. Sunderam: Experiments with distributed component computing across Grid boundaries, in Proceedings of the HPC-GECO/CompFrame workshop in conjunction with HPDC 2006, pp. 109-116. IEEE, Paris, France, June 2006.
114 M. Malawski; D. Harezlak and M.T. Bubak: Towards Multiprotocol and Multilanguage Interoperability: Experiments with Babel and RMIX, in M.T. Bubak; M. Turala and K. Wiatr, editors, Proceedings of Cracow Grid Workshop - CGW'05, November 20-23 2005, pp. 266-278. ACC-Cyfronet AGH, Krakow, Poland, 2006.
115 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: A Grid Service for Management of Multiple HLA Federate Processes, in R. Wyrzykowski; J.J. Dongarra; N. Meyer and J. Waśniewski, editors, Parallel Processing and Applied Mathematics: 6th International Conference (PPAM) 2005, Revised selected papers, in series Lecture Notes in Computer Science, vol. 3911, pp. 699-706. Springer, 2006. ISBN: 3-540-34141-2. (DOI: 10.1007/11752578_84)
116 K.J. Rycerz; M.T. Bubak; P.M.A. Sloot and V.S. Getov: Problem solving environment for distributed interactive applications, in S. Gorlatch; M.T. Bubak and T. Priol, editors, Integrated Research in Grid Computing, Integration Workshop, pp. 129-140. Academic Computing Centre CYFRONET AGH, Krakow, Poland, October 2006. ISBN 83-915141-6-1.
117 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: Grid support for HLA-based collaborative environment for vascular reconstruction, in P.M.A. Sloot; G.D. van Albada; M.T. Bubak and A. Trefethen, editors, 2nd IEEE International Conference on e-Science and Grid Computing, (Full paper on CD ROM) pp. 48+8. IEEE, 2006. ISBN 0-7695-2734-5. (DOI: 10.1109/E-SCIENCE.2006.77)
118 W. Rzasa; M.T. Bubak; B. Baliś and T. Szepieniec: Simulation method for estimation of security overhead of Grid applications, in M.T. Bubak; M. Turala and K. Wiatr, editors, Cracow '05 Grid Workshop, November 20-23 2005, pp. 300-307. Academic Computer Centre CYFRONET AGH, Cracow, Poland, 2006.
119 P.M.A. Sloot; A. Tirado Ramos; I. Altintas; M.T. Bubak and C.A.B. Boucher: From Molecule to Man: Decision Support in Individualized E-Health, IEEE Computer, (Cover feature) vol. 39, nr 11 pp. 40-46. November 2006.
120 P.M.A. Sloot; G.D. van Albada; M.T. Bubak and A. Trefethen: 2nd IEEE International Conference on e-Science and Grid Computing, (CD Only) IEEE, IEEE, 12 2006. ISBN 0-7695-2734-5.
121 H.-L. Truong; P. Brunner; T. Fahringer; F. Nerieri; R. Samborski; B. Baliś; M.T. Bubak and K. Rozkwitalski: K-WfGrid Distributed Monitoring and Performance Analysis Services for Workflows in the Grid, in International Conference on e-Science and Grid Computing, IEEE Computer Society Press, Amsterdam, The Netherlands, December 2006. (DOI: 10.1109/E-SCIENCE.2006.95)
122 H.-L. Truong; B. Baliś; M.T. Bubak; J. Dziwisz; T. Fahringer and A. Hoheisel: Towards Distributed Monitoring and Performance Analysis Services in the K-WfGrid Project, in R. Wyrzykowski and et al., editors, Parallel Processing and Applied Mathematics : 6th international conference, PPAM 2005: revised selected papers, in series Lecture Notes on Computer Science, vol. 3911, pp. 156-163. Springer-Verlag Berlin Heidelberg, 2006.
123 M. Wegiel; M.T. Bubak and B. Baliś: Fine-Grain Interoperability with Legacy Libraries Virtualized as Web Services, in Proc. Grid-Enabling Legacy Applications and Supporting End Users Workshop within the framework 15th IEEE International Symposium on High Performance Distributed Computing (HPDC.15), pp. 27-34. Paris, France, June 2006.
124 R.M. Badia; O. Beckmann; M.T. Bubak; D. Caromel; V.S. Getov; S. Isaiadis; V. Lazarov; M. Malawski; S. Panagiotidi and J. Thiyagalingam: Lightweight Grid Platform: Design Methodology, in CoreGRID Integration WorkShop 2005, (Also published as CoreGRID Technical Report TR-0020) 2005.
125 R.M. Badia; M.T. Bubak; W. Funika and M. Smetek: Performance monitoring of GRID superscalar applications with OCM-G, in S. Gorlatch and M. Danelutto, editors, CoreGRID Integration WorkShop 2005, pp. 229-236. Universitá di Pisa. Dipartimento di Informatica, 2005.
126 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: A Framework for HLA-Based Interactive Simulations on the Grid, Simulation: Transactions of The Society for Modeling and Simulation International, (Special Issue on Applications of Parallel and Distributed Simulation) vol. 81, nr 1 pp. 67-76. April 2005.
127 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: HLA Grid based support for simulation of vascular reconstruction, in S. Gorlatch and M. Danelutto, editors, TR-05-22, Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing", pp. 165-174. University of Pisa, Computer Science Department, Pisa, November 2005.
128 P.M.A. Sloot; C.A.B. Boucher; M.T. Bubak; A.G. Hoekstra; P. Plaszczak; A. Posthumus; D.A.M.C. van de Vijver; S. Wesner and A. Tirado Ramos: VIROLAB - A Virtual Laboratory for Decision Support in Viral Diseases Treatment, in Cracow Grid Workshop 2005, (best poster award) pp. 33+1. Cracow, Poland, November 2005.
129 P.M.A. Sloot; A.G. Hoekstra; T. Priol; A. Reinefeld and M.T. Bubak: Advances in Grid Computing - EGC 2005, in series Lecture Notes in Computer Science, vol. 3470, Springer, Berlin, Heidelberg, February 14-16 2005. ISBN 3-540-26918-5.
130 M.T. Bubak; G.D. van Albada; P.M.A. Sloot and J. Dongarra: Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part II, in series Lecture Notes in Computer Science, vol. 3037, Springer Verlag, Heidelberg, June 2004. ISBN 3-540-22115-8.
131 M.T. Bubak; G.D. van Albada; P.M.A. Sloot and J. Dongarra: Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part I, in series Lecture Notes in Computer Science, vol. 3036, Springer Verlag, Heidelberg, June 2004. ISBN 3-540-22114-X.
132 M.T. Bubak; G.D. van Albada; P.M.A. Sloot and J. Dongarra: Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part IV, in series Lecture Notes in Computer Science, vol. 3039, Springer Verlag, Heidelberg, June 2004. ISBN 3-540-22129-8.
133 M.T. Bubak; G.D. van Albada; P.M.A. Sloot and J. Dongarra: Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part III, in series Lecture Notes in Computer Science, vol. 3038, Springer Verlag, Heidelberg, June 2004. ISBN 3-540-22116-6.
134 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: Support for Effective and Fault Tolerant Execution of HLA-Based Applications in the OGSA Framework, in M.T. Bubak; G.D. van Albada; P.M.A. Sloot and J.J. Dongarra, editors, Computational Science - ICCS 2004: 4th International Conference, Kraków, Poland, June 6-9, 2004, Proceedings, Part III, in series Lecture Notes in Computer Science, vol. 3038, pp. 848-855. Springer Verlag, Heidelberg, June 2004. ISBN 3-540-22116-6.
135 K.J. Rycerz; B. Baliś; R. Szymacha; M.T. Bubak and P.M.A. Sloot: Monitoring of HLA Grid Application Federates with OCM-G, in S.J. Turner; D. Roberts and L. Wilson, editors, Eighth IEEE International Symposium on Distributed Simulation and Real-Time Applications (DS-RT'04), pp. 125-132. IEEE, Budapest, Hungary, October 2004. ISBN 3-540-22116-6.
136 K.J. Rycerz; M.T. Bubak; M. Malawski and P.M.A. Sloot: Interactive Grid Computing: Adapting High Level Architecture-based Applications to the Grid, TASK Quarterly, Scientific Bulletin of the Academic Centre of Gdansk, vol. 8, pp. 549-559. (P. Doerffer and J. Rybicki, editors), TASK Publishing, 2004.
137 P.M.A. Sloot; A. Tirado Ramos; A.G. Hoekstra and M.T. Bubak: An Interactive Grid Environment for Non-Invasive Vascular Reconstruction, in 2nd International Workshop on Biomedical Computations on the Grid (BioGrid'04), in conjunction with Fourth IEEE/ACM International Symposium on Cluster Computing and the Grid (CCGrid2004), (CD-ROM IEEE Catalog # 04EX836C) IEEE, Chicago, Illinois, USA, April 2004. ISBN 0-7803-8431-8.
138 A. Tirado Ramos; P.M.A. Sloot; A.G. Hoekstra and M.T. Bubak: An Integrative Approach to High-Performance Biomedical Problem Solving Environments on the Grid, Parallel Computing, (special issue on High-Performance Parallel Bio-computing) vol. 30, nr 9-10 pp. 1037-1055. (C.-H. Huang and S. Rajasekaran, editors), 2004.
139 A. Tirado Ramos; P.M.A. Sloot; A.G. Hoekstra and M.T. Bubak: An Integrative Approach to High-Performance Biomedical Problem Solving Environments on the Grid, Parallel Computing, (special issue on High-Performance Parallel Bio-computing) vol. 30, nr 9-10 pp. 1037-1055. (C.-H. Huang and S. Rajasekaran, editors), 2004.
140 K.J. Zajac; M.T. Bubak; M. Malawski and P.M.A. Sloot: Execution and Migration Management of HLA-Based Interactive Simulations on the Grid, in R. Wyrzykowski; J.J. Dongarra; M. Paprzycki and J. Waśniewski, editors, Parallel Processing and Applied Mathematics: 5th International Conference, PPAM 2003, Czestochowa, Poland, September 7-10, 2003. Revised Papers, in series Lecture Notes in Computer Science, vol. 3019, pp. 872-879. Springer-Verlag, Heidelberg, 2004. ISBN 3-540-21946-3.
141 A. Tirado Ramos; K.J. Zajac; Z. Zhao; P.M.A. Sloot; G.D. van Albada and M.T. Bubak: Experimental Grid Access for Dynamic Discovery and Data Transfer in Distributed Interactive Simulation Systems, in P.M.A. Sloot; D. Abramson; A.V. Bogdanov; J.J. Dongarra; A.Y. Zomaya and Y.E. Gorbachev, editors, Computational Science - ICCS 2003, Melbourne, Australia and St. Petersburg, Russia, Proceedings Part I, in series Lecture Notes in Computer Science, vol. 2657, pp. 284-292. Springer Verlag, June 2003. ISBN 3-540-40194-6.
142 K.J. Zajac; A. Tirado Ramos; Z. Zhao; P.M.A. Sloot and M.T. Bubak: Grid Services for HLA-based Distributed Simulation Frameworks, in F. Fernández Rivera; M.T. Bubak; A. Gómez Tato and R. Doallo, editors, First European Across Grids Conference, Santiago de Compostela, Spain, pp. 147-154. Springer-Verlag, Heidelberg, February 2003. ISBN 3-540-21048-2.
143 K.J. Zajac; M.T. Bubak; M. Malawski and P.M.A. Sloot: Towards a Grid Management System for HLA-Based Interactive Simulations, in S.J. Turner and S.J.E. Taylor, editors, Proceedings Seventh IEEE International Symposium on Distributed Simulation and Real Time Applications (DS-RT 2003), pp. 4-11. IEEE Computer Society, Delft, The Netherlands, October 2003.
144 M.T. Bubak; D. Zbik; G.D. van Albada; K.A. Iskra and P.M.A. Sloot: Portable Library of Migratable Sockets, Scientific Programming, vol. 9, nr apr-01 pp. 211-222. IOS Press, Amsterdam, The Netherlands, 2002. ISSN 1058-9244.
145 K.A. Iskra; R.G. Belleman; G.D. van Albada; J. Santoso; P.M.A. Sloot; H.E. Bal; H.J.W. Spoelder and M.T. Bubak: The Polder Computing Environment, a system for interactive distributed simulation, Concurrency and Computation: Practice and Experience, (Special Issue on Grid Computing Environments) vol. 14, pp. 1313-1335. John Wiley and Sons, 2002.
146 K.J. Zajac; M.T. Bubak; M. Malawski; P.M.A. Sloot and A. Tirado Ramos: A Proposal of Services For Managing Interactive Grid Applications, in M.T. Bubak; M. Noga and M. Turala, editors, Second Cracow Grid Workshop, pp. 155-163. ACC Cyfronet UMM, Cracow, Poland, December 11-14 2002.
147 M.T. Bubak; D. Zbik; G.D. van Albada; K.A. Iskra and P.M.A. Sloot: Migratable Sockets for Dynamic Load Balancing, in L.O. Hertzberger; A.G. Hoekstra and R.D. Williams, editors, Proceedings High-Performance Computing and Networking (HPCN Europe 2001), Amsterdam, The Netherlands, in series Lecture Notes in Computer Science, vol. 2110, pp. 23-31. Springer-Verlag, 2001. ISBN 3-540-42293-5.
148 M.T. Bubak; D. Zbik; G.D. van Albada; K.A. Iskra and P.M.A. Sloot: Portable Library of Migratable Sockets, in M.T. Bubak; J. Mościnski and M. Noga, editors, Proceedings of the SGI Users' Conference 2000, pp. 175-184. Academic Computer Centre CYFRONET AGH, Krakow, Poland, October 2000. ISBN 83-902363-9-7.
149 M.T. Bubak; W. Funika; D. Zbik; G.D. van Albada; K.A. Iskra; P.M.A. Sloot; R. Wismüller and K. Sowa-Pieklo: Performance Measurement, Debugging and Load Balancing for Metacomputing, in ISThmus 2000, Research and Development for the Information Society, Conference Proceedings, pp. 409-418. Instytut Informatyki, Politechnika Poznanska, Poznan, 2000. ISBN 83-913639-0-2.
150 M.T. Bubak; W. Funika; K.A. Iskra and R. Wismüller: Enhancing the Functionality of Performance Measurement Tools for Message Passing Environments, in J.J. Dongarra; E. Luque and T. Margalef, editors, Recent Advances in Parallel Virtual Machine and Message Passing Interface, Proceedings of the 6th European PVM/MPI Users' Group Meeting, Barcelona, Spain, September 1999, in series Lecture Notes in Computer Science, nr 1697 pp. 67-74. Springer-Verlag, September 1999. ISBN 3-540-66549-8.
151 M.T. Bubak; W. Funika; K.A. Iskra and R. Maruszewski: OCM-Based Tools for Performance Monitoring of Message Passing Applications, in P.M.A. Sloot; M.T. Bubak; A.G. Hoekstra and L.O. Hertzberger, editors, High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, The Netherlands, in series Lecture Notes in Computer Science, nr 1593 pp. 1270-1273. Springer-Verlag, April 1999. ISBN 3-540-65821-1.
152 P.M.A. Sloot; M.T. Bubak; A.G. Hoekstra and L.O. Hertzberger: Proceedings High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, The Netherlands, in series Lecture Notes in Computer Science, vol. 1593, 1999.
153 M.T. Bubak; W. Funika; K.A. Iskra; R. Maruszewski and J. Mościnski: Off-line Performance Monitoring using OMIS, in V.N. Alexandrov and J.J. Dongarra, editors, Recent Advances in Parallel Virtual Machine and Message Passing Interface, Proceedings of the 5th European PVM/MPI Users' Group Meeting, Liverpool, England, September 1998, in series Lecture Notes in Computer Science, nr 1497 pp. 5-11. Springer-Verlag, September 1998. ISBN 3-540-65041-5.
154 M.T. Bubak; W. Funika; K.A. Iskra; R. Maruszewski and J. Mościnski: Off-line and On-line Performance Monitoring Tools, in High Performance Computing on Hewlett-Packard Systems, Proceedings of HiPer'98 Conference, Zurich, Switzerland, October 14-16 1998, pp. 200-206. ETH Zurich, October 1998.
155 P.M.A. Sloot; M.T. Bubak and L.O. Hertzberger: Proceedings High-Performance Computing and Networking (HPCN Europe '98), Amsterdam, The Netherlands, in series Lecture Notes in Computer Science, vol. 1401, 1998.
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