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| J. Vidal Rodríguez: Stochasticity in Signal Transduction Pathways, PhD thesis, Universiteit van Amsterdam, (Promotor: Prof. Dr. P.M.A. Sloot, Co-promotor: Dr. J.A. Kaandorp) November 2009. ISBN 978-90-9024739-7.
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| M. Dobrzyński; J. Vidal Rodríguez; J.A. Kaandorp and J.G. Blom: Computational methods for diffusion-influenced biochemical reactions, Bioinformatics, vol. 23, nr 15 pp. 1969-1977. 2007. (DOI: doi:10.1093/bioinformatics/btm278)
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| J. Vidal Rodríguez and J.A. Kaandorp: Inferring the distribution of Inter-Reaction Intervals for Diffusion-Limited Reactions on Lattices, Intl. J. Mod. Phys. C, vol. 18, nr 4 pp. 749-757. April 2007. (DOI: 10.1142/S0129183107011017)
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| J. Vidal Rodríguez; J.A. Kaandorp; M. Dobrzyński and J.G. Blom: Spatial Stochastic Modelling of the phosphoenolpyruvate-dependent phosphotransferase (PTS) pathway in Escherichia coli, Bioinformatics, vol. 22, nr 15 pp. 1895-1901. 2006. (DOI: 10.1093/bioinformatics/btl271)
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| J. Vidal Rodríguez: Mesoscopic Stochastic Modelling for Biochemical Networks with Membrane-bound Molecules, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: J.A. Kaandorp) August 2004.
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