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Section Computational Science - Master of Science theses

1 J. Jänes: Efficient integration of multiscale N-body systems, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisors: F.I. Pelupessy and S.F. Portegies Zwart) July 2011.
2 I. Niculescu: Towards a cell-based model of Neointimal Hyperplasia with Cellular Potts Model, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisors: A.G. Hoekstra and R.M.H. Merks) April 2011.
3 T. Wood: Applications of GPUs in Computational Finance, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisors: R.G. Belleman and B.D. Kandhai) October 2010.
4 A.Z. Özsoy: Interactive Visualization of Large Medical Datasets on the Grid, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: R.G. Belleman) April 2009.
5 F.I. Rusadi: Interactive Visualization of Graphs on Multiple Levels of Detail Using a Direct-Touch Interactive Graphics Device, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: R.G. Belleman) August 2009.
6 N. Zarrabi: Modeling and Simulation of HIV-1 Intracellular Replication, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: P.M.A. Sloot) August 2009.
7 D.M. Chu: A survey of classical simulation methods for quantum computation, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisors: H. Buhrman and R. de Wolf) June 2008.
8 M.V. Filatov: A compression-based group similarity measure with applications in phylogeny. Automatic detection of viral RNA recombination., MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: B. Ó Nualláin) April 2008.
9 J.B.W. Geerdink: Entropic and multiple relaxation time lattice Boltzmann methods compared for time harmonic flows, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: A.G. Hoekstra) January 2008.
10 L.Y.L. Muller: Multi-touch displays: design, applications and performance evaluation, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: R.G. Belleman) June 2008.
11 R. Quax: Modeling and Simulating the Propagation of Infectious Diseases Using Complex Networks, MSc thesis, Georgia Institute of Technology, Atlanta, GA, USA, (Supervisor: David Bader) August 2008.
12 B. Rexhepi: The Volatility Smile Dynamics Implied by Smile-Consistent Option Pricing Models and Empirical Data, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisors: B.D. Kandhai and G.-Z. Qiu) August 2008.
13 A. Sottoriva: Mathematical Modeling of Tumour Growth and Invasion Using a Hybrid Cellular Automaton, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Supervisor: P.M.A. Sloot, Co-advisor L. Vermeulen) August 2008.
14 J. Bédorf: High Performance Direct Gravitational N-body Simulations on Graphics Processing Units - An implementation in CUDA, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisors: R.G. Belleman and S.F. Portegies Zwart) November 2007.
15 P.M. Geldof: Generic Computing on a Graphics Processing Unit, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: R.G. Belleman) May 2007.
16 T. de Kler: Integration of the ARToolKitPlus optical tracker into the Personal Space Station, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: R.G. Belleman) May 2007.
17 M. Lankamp: Developing a reference implementation for a microgrid of microthreaded microprocessors, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: C.R. Jesshope) August 2007.
18 K.C. Maheshwari: Problem Solving Environment for Medical Image Analysis Application Development, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: S. Olabarriaga and A.S.Z. Belloum) September 2007.
19 Z.R. Rahhal: Interactive Distributed Computing Middleware, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: R.G. Belleman) May 2007.
20 R.J. Strijkers: The Network is in the Computer, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (R.J. Meijer) March 2007.
21 D.J. Groen: Reliability Analysis of Grid Resources: A User Perspective, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (G.D. van Albada and J. Templon, and D.L. Groep and A. Tirado-Ramos) August 2006.
22 N. Sluijs: Simulating Flow around a Complex Geometry, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: J.G. Blom and J.A. Kaandorp) June 2006.
23 M. van Woudenberg: Using FPGAs to Speed Up Cellular Automata Computations, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, (Advisor: A.G. Hoekstra) August 2006.
24 J. Wu: Implementing microthreaded microprocessors in VHDL, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: C.R. Jesshope) August 2006.
25 N. Yang: A Service-Oriented Visualization of Medical Data, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: E.V. Zudilova-Seinstra) August 2006.
26 R. Huo and Q. He: A Projection and Its Implementation of a Ruby Subset to Program Algebra, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: I. Bethke and A. Ponse) August 2005.
27 B. Leskes: The Value of Agreement - a new boosting algorithm, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: L. Torenvliet and P. Grunwald and P. Adriaans and P. van Emde Boas) February 2005.
28 P.J. Manchego: Methodologies of Retrieval, Management and Mediation of Sensor Data, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: R.J. Meijer and G.D. van Albada) November 2005.
29 D.Q.A. Nguyen: Robust tracking of input props with webcams, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: R. van Liere) July 2005.
30 I. Vankov: Relational Approach to Program Slicing, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: P. Klint) August 2005.
31 V.T. Vu: IMEX/Finite Volume for chemical reactions in fluid flow, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: J.G. Blom and J.A. Kaandorp) November 2005.
32 Z.-D. Wang: Microsimulation of Financial Markets, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: B.D. Kandhai and G. Qiu and P.M.A. Sloot) November 2005.
33 Y.-G. Zhang: Experimental Validation of the Grid Speedup Theory, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: A.G. Hoekstra) July 2005.
34 M. Ashyraliyev: Implicit Schemes for the Lattice Boltzmann Equation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: A.G. Hoekstra) August 2004.
35 H.V. Bui: The Network as a Data Transporting and Data Storing Application, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: R.J. Meijer) August 2004.
36 H.S.M. Cramer: Usability Evaluation And Context Analysis To Aid The Development Of Virtual Reality Applications applied to the Virtual Radiology Explorer, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: V. Evers and E.V. Zudilova) November 2004.
37 I.V. Korjoukov: A Cognitive Model of Human Drawing, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: E.V. Zudilova) August 2004.
38 T.A. Kvaløy: Semantic Web Services Automated Matching, Composition and Selection, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: E. Rongen and A. Tirado-Ramos and P.M.A. Sloot) October 2004.
39 M. Meijer: Scheduling parallel processes using Genetic Algorithms, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: G.D. van Albada) February 2004.
40 M.J. Patrick: Data Comunnication Infrastructure for Distributed Real-Time Simulation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: A. Tirado-Ramos and P.M.A. Sloot) August 2004.
41 A. de Ridder: Collaboration in the Virtual Laboratory for e-Science, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: A.S.Z. Belloum) October 2004.
42 J. Vidal Rodríguez: Mesoscopic Stochastic Modelling for Biochemical Networks with Membrane-bound Molecules, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: J.A. Kaandorp) August 2004.
43 D.F.A. Vismans: Enabling Intelligent Interaction in Virtual Environments - A Generic Architecture, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: J.A. Kaandorp) May 2004.
44 F. Wu: A Probabilistic Multimedia Retrieval Model, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisors: A.P. de Vries and J.A. Kaandorp) August 2004.
45 J. Cui: Mathematical Modelling of Calcium homeostasis in Yeast Cells, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: J.A. Kaandorp) August 2003.
46 Jiajia Cui: Pricing Interest Rate Guarantees embedded in Life Insurance Contracts by Monte Carlo Simulation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: B.D. Kandhai) August 2003.
47 D.P. Gavidia Simonetti: Interactive Visualization of Biomedical Data, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: E.V. Zudilova) August 2003.
48 T. Krul: Modelling and Inferring Developmental Networks, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: J.A. Kaandorp) July 2003.
49 N. Kulk: On the Computational Complexity of Lattice Gas Automata, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: A.G. Hoekstra) June 2003.
50 K. Sakkos: Physical Properties of Dendritic Structures under a constant Electric Field, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, June 2003.
51 C.P. Salzberg: Emergent Evolutionary Dynamics of Self-Reproducing Cellular Automata, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Advisor: Hiroki Sayama, University of Electro-Communications, Chofugaoka, Chofu, Tokyo) August 2003.
52 C. Shen: Effectiveness of Approximation Models for Multi-Disciplinary Design Optimization, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2003.
53 J. Xiao: A High Performance Distributed Computing Architecture for Molecular Image-Guided Local Drug Delivery - An exercise in scenario based architecture design using the AFCR model, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2003.
54 F. Alimadhi: Mobile Internet: Wireless access to Web-based interfaces of legacy simulations, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2002.
55 W. Caarls: Genetic Alorithms Visualisation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, April 2002.
56 F. Chen: Model of Drug Therapy for HIV Infection using Non-uniform Cellular Automata, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2002.
57 M. ten Dam: Multi-disciplinair ontwerp en multi-objective optimalisatie van een blended-wing-body vliegtuigconfiguratie met behulp van benaderingsmodellen, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (in Dutch) February 2002.
58 A. Hendriks: Towards 3D finite difference simulations of fluid flow in an interactive virtual reality environment, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2002.
59 E.A. Koopman: A comparison of a particle tracking and a lattice Boltzmann based method for advection diffusion problems, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, November 2002.
60 T. Li: Web Services Technology - Design, Implementation and Evaluation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, June 2002.
61 K. Oinonen: Local curvature as a measurement of shape for three-dimensional complex objects, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, January 2002.
62 J.M. Ragas: Interactive visualization of flowfields in an Immersive Virtual Environment - Applied to the test case of simulated abdominal vascular reconstruction, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2002.
63 A. Suinesiaputra: Multiscale optic flow analysis for Magnetic Resonance tagging, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2002.
64 A. Wibisono: Cross Cluster Migration using Dynamite - Remote File Access Support, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2002.
65 I. Altintas: A Comparative Study for Component Oriented Design Modeling, MSc thesis, , May 2001.
66 W. Hanegraaff: Simulating the Immune System, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2001.
67 D.L. Hannema: Interaction in Virtual Reality, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2001.
68 R.A. García Leiva: Morphological Analysis of Branching Structures, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2001.
69 G. Qiu: An Overview of Computational Hemodynamics, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 2001.
70 J.W. Wang: Cross-cluster migration of parallel tasks, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 2001.
71 D. Fontijne: Rigid body simulation and evolution of virtual creatures, MSc thesis, Universiteit van Amsterdam, August 2000.
72 M.O. Frijlink: Application of the Discrete Dipole Approximation to Radiation Pressure Calculations on Dust-Aggregates: An Exploration, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, April 2000.
73 M. al Mourabit: Time Warp performance: An empirical study of rollback in the APSIS Time Warp kernel, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, August 2000.
74 M. Bani Aman: Reactive lattice gas automaton, MSc thesis, Universiteit van Amsterdam, May 1998.
75 E. Berk: Towards a parallel implementation of Lindenmayer systems, MSc thesis, Universiteit van Amsterdam, January 1998.
76 J.M. Braan: Prototyping a distance learning environment on the internet: rationale and implementation, MSc thesis, Universiteit van Amsterdam, April 1998.
77 S. Calor: Cellular automaton models for population dynamics, MSc thesis, Universiteit van Amsterdam, March 1998.
78 S.S. Ghoreifi: Modeling accretive growth with particle systems using pair interactions, MSc thesis, Universiteit van Amsterdam, September 1998.
79 M. Visser: A comparison of data decomposition techniques applied to the lattice Boltzmann method, MSc thesis, Universiteit van Amsterdam, March 1998.
80 M. Zwaal: Evaluation of an LP based solution method for slot allocation, MSc thesis, Universiteit van Amsterdam, March 1998.
81 R.G. Belleman: CACE - a case study in embedded system design., MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 1997.
82 J. van den Brink: Performance metrics in parallel simulation, MSc thesis, Universiteit van Amsterdam, May 1997.
83 D.A. Burer: Parallel molecular dynamics: applied to crystallization on a sphere, MSc thesis, Universiteit van Amsterdam, May 1997.
84 D. Dubbeldam: Lattice-Boltzmann simulation of fluid flow in a counterflow centrifucal elutriation chamber, MSc thesis, Universiteit van Amsterdam, December 1997.
85 L. Schaper: A parallel hierarchical radiosity solution for distributed memory machines, MSc thesis, Universiteit van Amsterdam, 1997.
86 A. de Wit: A comparison of message passing and data parallelism on the NLR NEC SX-4/16, MSc thesis, Universiteit van Amsterdam, January 1997.
87 J. de Rue: On the normal modes of freely vibrating elastic objects of various shapes, MSc thesis, University of Amsterdam, Amsterdam, the Netherlands, March 1996.
88 A.W. van Halderen: A tool for application performance prediction, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 1995.
89 B.D. Kandhai: Parallelization of a simple general circulation model, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 1995.
90 B. Timsi: Fast multipole methods for computer simulations of elastic light scattering, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 1995.
91 J. van Brummen: MERMAID: Modelling and evaluation research in MIMD architecture design, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 1994.
92 M.A. Guravage: Systolic Quadratic Shading, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 1994.
93 F. van der Linden: The implementation of portable programming layers: a case study, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, June 1994.
94 A. de Mes: An Abstract Machine for Execution Time Estimation, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 1994.
95 A. Schoneveld: An Abstract Cellular Genetic Algorithm, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, June 1994.
96 J.M. Spijk: The Optimization of Functions by means of Parallel Genetic Algorithms, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, June 1994.
97 J.J.J. Vesseur: Parallel Programming on a Distributed System, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 1994.
98 A.P. Wals: The use of a tree topology on a distributed memory system for the implementation of the Conjugate Gradient method, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, November 1994.
99 L. Dikken: DynamicPVM: Task Migration in PVM, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (Published as technical report: Report no. ICS/155.1, Shell Research, Amsterdam) November 1993.
100 H. McEvoy: Towards a Parallel Implementation of Gamma, MSc thesis, Imperial College of Science, Technology and Medicine, London, United Kingdom, September 1993.
101 A.D. Pimentel: The Parallelisation of the Object-oriented Simulation Language Pearl, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, August 1993.
102 G.G. Pronk: Performance analysis and implementation of Gauss-Huard elimination, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, November 1993.
103 A. ter Laak: Parallelizing Fast Simulated Annealing: Experiments on a distributed memory system, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, September 1991.
104 H.J. Noordmans: Ontwikkeling van een experimentele methode voor de bepaling van de komplete verstrooiingsmatrix van biologische deeltjes in een flowcytometer, MSc thesis, University of Amsterdam, Amsterdam, The Netherlands, (in Dutch) October 1991.

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G.D. van Albada at uva.nl